I will analyze your bulk rnaseq data with publication ready figures

United Kingdom

I speak English, Turkish, German, Spanish

Bioinformatics Specialist Data Scientist

PhD bioinformatics specialist with 8 years delivering genomic analysis and automated pipelines for clinical diagnostics and academic research. I help researchers and biotech companies analyze sequenci...
About this Gig

Struggling with RNA-seq analysis? I'll transform your raw sequencing data into publication-quality results.


WHAT YOU GET:

Quality control reports (FastQC, MultiQC)

Differential expression analysis (DESeq2 or edgeR)

Volcano plot showing up/downregulated genes

PCA plot with sample clustering

Heatmap of top differentially expressed genes

GO/KEGG pathway enrichment analysis

CSV files with all statistics and gene lists

Written methods section (ready for your paper)


WHAT I NEED FROM YOU:

- FASTQ files (or SRA accession numbers)

- Sample information (which samples are control vs treatment)

- Organism name (I can work with any species with a transcriptome)


I use industry-standard tools: Salmon/STAR for alignment, DESeq2/edgeR for statistics, clusterProfiler for pathway analysis. All analysis is fully reproducible with documented code.


EXPERIENCE: Multi-tissue RNA-seq (brain, liver, kidney, testes, fat) Time-series experiments (photoperiod response) Low-count data and rare transcripts Clinical variant calling from RNA-seq Non-model organisms without annotation.


Questions? Message me before ordering. I'm happy to discuss your specific needs and recommend the right package!

Technology:

Pandas

RStudio

Analysis type:

Quantitative analysis

Statistical analysis

Expertise:

Experiment design

Statistics

Other

Programming language:

Python

R