I will virtual screen 5k ligands using molecular docking

Bangladesh

I speak English

30 orders completed

I have over 15 years of experience in life sciences in the USA, Japan, and Bangladesh. I have published over 30 research articles in renowned international peer-reviewed journals, including Nature, Sc...

Level 2

Has met high performance criteria and has a proven track record for meeting client expectations.

About this Gig

I will virtual screen thousands of ligands (small molecules, drug candidates) using molecular docking with AutoDock Vina.

Ligand structures: The client must provide the ligands in SMILES or sdf format.

Single protein: The client must provide the PDB ID or the pdb file.

[Not protein-protein or protein-peptide docking. Please check my other gig for this].

You will get

Docking scores

Docked ligands in pdbqt format

Publication quality high-resolution figures for top 3 complexes

Protein-ligand interactions for top 3 ligands

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Please ask me for details before placing the order.

Programming language:

Python

R

Other

Technology:

Excel

Google Sheets

Jupyter Notebook

Analysis Type:

Quantitative Analysis

Qualitative Analysis

Expertise:

Experiment design

Prediction

Probability

Statistics

Tools:

Jamovi

Other