I will download and align your fastq samples to the genome

Guillermo

Spain

I speak English, Spanish, French

6 orders completed

As a Ph.D. researcher at the National Cancer Research Center, my specialization involves providing advanced bioinformatic analysis, particularly in key areas such as RNA-seq, CRISPR-Screening, single-...
Read More
About this Gig

Public microarray or RNAseq data are really useful for different analyses. These files are very heavy, and a powerful computational infrastructure is needed to obtain them. Using a linux HPC, I will download all your data (fastq samples) from public databases such as SRA, ENA, NIH, etc. I will align them to the genome (human, mouse, zebrafish...) using STAR or Salmon aligner, and I will give you the raw counts with which you will be able to perform downstream analysis.


In addition, I will provide you with an html report with the metrics, statistics and quality control steps of the aligned samples.


Each sample will cost $5


If you have any questions, write me and we'll talk!

Read More
download and align your fastq samples to the genome
Full Screen
download and align your fastq samples to the genome

Technology:

Python

•

RStudio

•

Other

Information type:

Listings

•

Other

Technique:

Manual