I will build an automated fasta sequence analysis pipeline in bash and python

Pakistan

I speak Urdu, English

transitioning into Bioinformatics

Currently building skills in Linux terminal workflows, NCBI/EMBL-EBI databases, and sequence analysis. 🎯 Aiming to contribute to open-source bioinformatics tools and computational research. 💡 Intere...
About this Gig

Are you looking for a reliable and high-speed automated pipeline to process FASTA biological sequences without manual labor? 


I specialize in building modular, reproducible Bash and Python pipelines tailored for NCBI FASTA sequence extraction and downstream bioinformatics analysis.


### What I Offer in This Gig:

- Automated NCBI Sequence Retrieval: Batch download FASTA sequences using Accession IDs.

- Sequence Statistics & Metrics: Calculate total length, GC/AT content percentages, and N50 statistics.

- Window-Based GC Profiling: Detailed GC content analysis across sliding windows.

- Sequence Manipulation: Automated reverse complement generation and FASTA header cleaning.

- Structured Data Export: Clean TSV/CSV reports for downstream analysis.


### Why Choose My Service?

- Clean, Well-Documented Code: Modular Bash and Python scripts designed for seamless reusability.

- Storage-Optimized Workflows: Efficient command-line execution on Linux environments.

- Fast Turnaround & Full Support: Detailed user instructions included for smooth execution on your terminal.


Feel free to send me a message with your specific project requirements before placing an order!

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