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I will analyze single cell rna seq and spatial transcriptomics data
Simple Solutions for Complex Biomedical Data
Hi, my name is Jonathan Alles.
I am an independent bioinformatics and data engineering consultant.
Through my agency, EVOBYTE Digital Biology, I support professionals with biomedical data engineering ...
Level 1
Has met certain performance criteria and shows strong potential in the marketplace.
About this Gig
Do you need support in analyzing, integrating or interpreting single cell omics data?
I support research teams in data analysis for scRNA-Seq, single cell immune receptor or spatial omics analysis.
Customized analysis are possible: Get in touch for a quote.
What I Offer:
Bioinformatics Analysis
- Bioinformatic processing of sequencing raw data
- Aggregation, filtering, cleaning, batch correction
- Metadata ingestion
- Clustering and cluster annotation
- Differential gene expression
- Trajectory inference
- GSEA / GO Term Analysis
- Spatial neighborhood analysis
Visualization & Reporting
- Jupyter notebook including analysis code
- Custom PDF or HTML reports
- Dashboards for data query
Pipeline Development & Automation
- Automation and scaling of analysis pipelines
- Database and cloud integration
- Containerization
Data Curation
- Collect (single-cell) omics data for a specific indication, therapeutic modality, species,...
- Mine public data source and databases and return integrated dataset
Tech Stack
Python / Pandas / scVerse / scipy / Jupyter / TF / Bash / Cell Rank / squidpy / scVelo
Let's Build Together!
Have a project in mind? Message me to discuss your requirements, and I'll provide a customized
My Portfolio
FAQ
How are data analysis reports being reported?
You will receive both the data analysis scripts as python code or jupyter notebooks as well as a report file and/or presentation explaining the data analysis and conclusions.
Reviews
2 reviews for this Gig
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Rating Breakdown
- Seller communication level
- Quality of delivery
- Value of delivery
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Most relevant
J j_chem23
Canada
Extremely knowledgeable researcher with a high quality of work and professionalism. Reliable data analysis with easy to observe and digest results. Highly recommend.
$400-$600
Price
8 days
Duration
Helpful?M matteobertelli
Italy
Jonathan Alles is an outstanding professional in the field of Data Analytics. His meticulous attention to detail, unwavering professionalism, and exemplary responsiveness greatly contributed to a smooth and efficient collaboration. The quality of his work is exceptional, and I would unreservedly recommend...
$600-$800
Price
3 weeks
Duration
Helpful?
Reviews
2 reviews for this Gig
| (2) | ||
| (0) | ||
| (0) | ||
| (0) | ||
| (0) |
Rating Breakdown
- Seller communication level
- Quality of delivery
- Value of delivery
Sort By
Most relevant
J j_chem23
Canada
Extremely knowledgeable researcher with a high quality of work and professionalism. Reliable data analysis with easy to observe and digest results. Highly recommend.
$400-$600
Price
8 days
Duration
Helpful?M matteobertelli
Italy
Jonathan Alles is an outstanding professional in the field of Data Analytics. His meticulous attention to detail, unwavering professionalism, and exemplary responsiveness greatly contributed to a smooth and efficient collaboration. The quality of his work is exceptional, and I would unreservedly recommend...
$600-$800
Price
3 weeks
Duration
Helpful?
