I will perform rnaseq differential expression analysis on your dataset

Zambia

I speak English

Bioinfomatics Pipeline Developer

I build reproducible bioinformatics pipelines for NGS data analysis, specializing in RNA-seq differential expression and cancer genomics. Recent project: RNA-seq pipeline on NCBI breast cancer dat...
About this Gig

Are you a researcher or scientist with RNA-seq data 

that needs professional analysis?


I will analyze your RNA-seq dataset and identify 

differentially expressed genes using DESeq2, delivering 

publication-ready results.


WHAT I OFFER:

- Alignment to reference genome using HISAT2

- Differential expression analysis with DESeq2

- Volcano plot and heatmap of top DEGs

- Full HTML analysis report

- Clean, documented R and Python scripts

DELIVERABLES INCLUDE:

- DESeq2 differential expression results

- GO Biological Process enrichment analysis

- Reactome pathway analysis with clinical pathways

- Publication-ready figures

- Full HTML report

MY EXPERIENCE:

I built a complete RNA-seq pipeline analyzing real 

breast cancer genomics data from NCBI dataset 

PRJNA432903. Identified 2298 significant DEGs with 

PC1 explaining 86% of variance.


WHAT I NEED FROM YOU:

- Raw FASTQ files or pre-processed count matrix

- Reference genome or organism name

- Experimental conditions and sample information


TOOLS USED:

R, DESeq2, HISAT2, featureCounts, Python, Bash, 

Git, Linux, ggplot2, EnhancedVolcano


Order now and get accurate, reproducible 

bioinformatics results delivered on

Expertise:

Predictive analysis

Programming language:

Python

R

Frameworks:

Panda

Tools:

Jupyter Notebook

Colab

RStudio