I will do bioinformatics rna seq dna seq analysis and variant calling

Naveed Rehman

Pakistan

I speak Urdu, English

2 orders completed

LLM Developer

At Nodeable.ai, I work as an AI Developer, concentrating on AI automation and developing advanced AI voice agent technologies. My expertise includes deploying FastAPI for efficient and innovative solu...
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About this Gig

Need reliable, publication-ready bioinformatics analysis? You're in the right place.

I provide end-to-end NGS analysis for RNA-Seq and DNA-Seq, including full variant calling and annotation, following GATK Best Practices and current gold-standard tools.

RNA-Seq: quality control, trimming, alignment (STAR / HISAT2 / Salmon), quantification, differential expression (DESeq2 / edgeR), and functional enrichment (GO / KEGG / GSEA) with PCA, volcano plots, and heatmaps.

DNA-Seq & Variant Analysis: alignment (BWA-MEM), duplicate marking, BQSR, variant calling (GATK HaplotypeCaller / Mutect2 / DeepVariant / bcftools), plus annotation (VEP / ANNOVAR / SnpEff) and filtered, prioritized variant tables.

You receive clean, reproducible results: processed files, annotated tables, high-resolution figures, and a clear methods summary you can drop straight into a paper or report.

I work with human, model, and non-model organisms across germline and somatic studies.

New project or not sure what you need? Message me first and I'll map the exact pipeline and quote for your data.

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do bioinformatics rna seq dna seq analysis and variant calling
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do bioinformatics rna seq dna seq analysis and variant calling
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do bioinformatics rna seq dna seq analysis and variant callingdo bioinformatics rna seq dna seq analysis and variant calling

Programming language:

Python

•

R

Technology:

Jupyter Notebook

Analysis Type:

Qualitative Analysis

•

Impact Analysis

+3 more

Expertise:

Algorithms

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Prediction

•

Probability

•

Statistics

+3 more

Tools:

RStudio

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Google Colab

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Microsoft Excel

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