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I will perform transcriptomics and qsar modelling
Computational Biology and Bioinformatics Researcher I Multi omics I Python, R
Bioinformatics expert specializing in Python, R, and Bash scripting, with a strong emphasis on research-driven computational solutions. Expertise includes machine learning, multi-omics integration, di...
About this Gig
I offer rigorous, publication-ready transcriptomics analysis from raw count matrices to biological interpretation using DESeq2, WGCNA, and pathway enrichment tools in R and Python.
I offer:
- Differential Expression Analysis: DESeq2, limma, edgeR
- WGCNA: co-expression network construction, hub gene identification, trait correlation
- Pathway Enrichment: GO, KEGG, Reactome using clusterProfiler
- ssGSEA: immune cell infiltration and gene set scoring
- GEO Dataset Handling: data retrieval, preprocessing, normalization
- Visualization: volcano plots, heatmaps, PCA, pheatmap, ggplot2
- Integration with drug discovery or network pharmacology pipelines
Skills:
- R · DESeq2 · WGCNA · limma · clusterProfiler · ggplot2 · pheatmap
- Python · pandas · matplotlib · seaborn
- GEO · TCGA · KEGG · Reactome · GO
Why choose me:
- Hands-on experience with real COPD and cancer transcriptomics datasets
- Clean, annotated R scripts delivered with every order
- Figures formatted to journal submission standards
- Responsive and detail-oriented throughout the project
- Comfortable handling messy, real-world GEO datasets
Technology:
Excel
•
Google Sheets
•
Jupyter Notebook
•
Pandas
•
RStudio
Expertise:
Statistics
Programming language:
Python
•
R
My Portfolio
FAQ
I don't have a specific script in mind, just a problem. Can you still help?
Yes — message me with your data and what you're trying to figure out, and I'll suggest the right approach before you order. No need to know the technical details yourself.
Will you keep my data and research confidential?
Yes. Your data, research idea, and results are never shared, reused, or discussed with anyone. This stays strictly between us.
I'm not very experienced with coding — will I understand the final script?
Yes. I write clean, commented code and explain the output in plain language, not just technical jargon. You'll understand what the script does and why.
Can you work with my specific dataset/database (GEO, ChEMBL, PDB, NCBI, etc.)?
Yes, I regularly work with all major biological databases. Just mention which one in your message and I'll confirm I can handle it.
Do you need my full dataset before I order, or can I send it after?
Either works. If you message me first with a sample or description of your data, I can confirm scope and timeline before you place the order — this avoids any surprises.
Is this only for students, or do you work with researchers and companies too?
I work with anyone — students, PhD researchers, professors, and companies. The scope and pricing packages adjust to your project's complexity.
