I will perform rna seq, dge analysis, wgcna, and transcriptomics

Samskruthi J

India

I speak Kannada, English, Hindi

Computational Biology and Bioinformatics Researcher I Multi omics I Python, R

Bioinformatics expert specializing in Python, R, and Bash scripting, with a strong emphasis on research-driven computational solutions. Expertise includes machine learning, multi-omics integration, di...
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About this Gig

I offer rigorous, publication-ready transcriptomics analysis from raw count matrices to biological interpretation using DESeq2, WGCNA, and pathway enrichment tools in R and Python.

I offer:

  • Differential Expression Analysis: DESeq2, limma, edgeR
  • WGCNA: co-expression network construction, hub gene identification, trait correlation
  • Pathway Enrichment: GO, KEGG, Reactome using clusterProfiler
  • ssGSEA: immune cell infiltration and gene set scoring
  • GEO Dataset Handling: data retrieval, preprocessing, normalization
  • Visualization: volcano plots, heatmaps, PCA, pheatmap, ggplot2
  • Integration with drug discovery or network pharmacology pipelines

Skills:

  • R · DESeq2 · WGCNA · limma · clusterProfiler · ggplot2 · pheatmap
  • Python · pandas · matplotlib · seaborn
  • GEO · TCGA · KEGG · Reactome · GO

Why choose me:

  • Hands-on experience with real COPD and cancer transcriptomics datasets
  • Clean, annotated R scripts delivered with every order
  • Figures formatted to journal submission standards
  • Responsive and detail-oriented throughout the project
  • Comfortable handling messy, real-world GEO datasets
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perform rna seq, dge analysis, wgcna, and transcriptomics
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perform rna seq, dge analysis, wgcna, and transcriptomics

Technology:

Excel

•

Google Sheets

•

Jupyter Notebook

•

Pandas

•

RStudio

Analysis type:

Quantitative analysis

•

Qualitative analysis

+1 more

Expertise:

Statistics

Programming language:

Python

•

R

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