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I will analyze your 16s its microbiome data using qiime2 bioinformatics
Hello, my name is Steven Criollo. I am a biotechnology engineer with a master's degree in bioinformatics and biostatistics. I teach bioinformatics and also work as a bioinformatician for a next-genera...
About this Gig
Types of analysis:
BASIC ANALYSIS:
- Data Quality Control.
- Denoising and clustering (ASV).
- Taxonomic classification.
- Relative abundance.
- Phylogenetic tree.
STANDARD ANALYSIS:
Basic analysis +
- Rarefaction curves.
- Alpha Diversity Analysis: Shannon index, observed features, Faith's phylogenetic diversity, Pielou's evenness.
- Beta Diversity Analysis: Jaccard distance, Bray-Curtis distance, unweighted UniFrac distance, weighted UniFrac distance.
- Ordination Methods: Principal Coordinates Analysis (PCoA), Uniform Manifold Approximation and Projection (UMAP).
- Differential Abundance Test with ANCOM-BC.
- Statistical Significance Tests: Kruskal-Wallis, PERMANOVA (ADONIS), ANOSIM, PERMDISP.
PREMIUM ANALYSIS:
Standard analysis +
- Enzymatic Reactions (EC).
- Genes (KO / KEGG Orthology).
- Metabolic Pathways (MetaCyc).
- Comparative Analysis.
Notes:
*The Standard and Premium packages require experimental group information and at least 3 biological replicates per group to perform diversity and statistical analyses.
*The listed price is per sample. Discounts are available for projects with multiple samples.
FAQ
How will I receive my results?
Your results are delivered via a cloud storage link containing all files generated during the analysis, including QIIME2 files (.qza/.qzv), publication-ready figures, tables, and an HTML report with a step-by-step explanation of the analysis and clear, easy-to-understand presentation of all results.
