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I will analyze rnaseq data from raw reads to functional enrichment
Bioinformatician and PhD Researcher
Hi! I hold an MSc in Bioinformatics and am currently a PhD student and researcher dedicated to genomics and molecular biology. I have extensive experience handling large-scale biological data, buildin...
About this Gig
Welcome to my Bioinformatics & RNA-Seq Gig!
Need rigorous, publication-ready analysis for your Illumina RNA-Seq data? As an MSc in Bioinformatics and current PhD student, I provide end-to-end processing tailored to your research. I turn raw FASTQ files or count matrices into clear, reproducible results.
What I offer:
- Quality Control: FastQC and read trimming.
- Alignment: Accurate mapping to the reference genome.
- Differential Expression (DEGs): Statistical analysis using DESeq2.
- Functional Enrichment: GO and KEGG pathways via clusterProfiler.
- Publication-Ready Plots: High-res Heatmaps, Volcano Plots, PCA, and networks.
Tools: R, Python, and Bioconductor packages.
⭐ Why me?
- Academic Rigor: Active researcher developing reliable pipelines.
- Reproducibility: Clean scripts ready for your methods section.
- Biological Focus: Dedicated to your specific research question.
️ IMPORTANT: Please message me BEFORE ordering! We need to discuss your experimental design and sample size to guarantee the best custom offer. Let's get your paper published!
Domain:
Machine Learning
Expertise:
Classification
•
Clustering
•
Ranking
•
Decision trees
Programming language:
Python
•
R
Tools:
Jupyter Notebook
•
Excel
•
Colab
•
Other
Technology:
Python
•
R
•
scikit-learn
•
Jupyter Notebook
•
Pandas
•
RStudio
FAQ
What type of files do I need to provide to start the order?
It depends on the package you choose. For the Basic package, I need your raw sequencing reads (FASTQ files). For the Standard and Premium packages, if you have already performed the alignment, you can provide the raw count matrix (.csv, .tsv, or .txt format).
How many samples are included in the base price?
The base prices for all packages cover an analysis of up to 6 samples (for example, 3 control samples vs. 3 treatment samples). If your experimental design includes more samples, please message me for a custom offer, as processing time will increase.
Can you analyze data from non-model organisms?
Yes! As long as there is an annotated reference genome and a GTF/GFF file available in public databases (like NCBI or Ensembl), I can perform the analysis. Please contact me before ordering so I can verify the availability of the reference genome for your organism.
Will I receive the scripts used for my analysis?
Yes! If you select the Premium package, I will provide the clean, well-commented R or Python scripts used to generate your results. This ensures complete transparency and reproducibility, making it easy for you to write your methodology section.
What if I need a very specific or highly customized plot for my paper?
The Standard and Premium packages already include high-quality, standard plots (such as PCA, Volcano Plots, and standard Heatmaps). However, if you need a highly specific or customized figure (like complex interaction networks or specific custom themes), you can add the "Extra Custom Plot" option wh
How do I send you my large data files (FASTQ)?
Fiverr has a file size limit for direct uploads. For large sequencing files, you can share a secure link via Google Drive, Dropbox, OneDrive, or directly from sequencing servers/repositories (like SRA/ENA), and I will download them securely.
